STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
21.m02925Rab geranylgeranyltransferase, beta subunit. (457 aa)    
Predicted Functional Partners:
17.m07834
Protein prenyltransferase alpha subunit repeat domain containing protein.
    
 0.952
17.m07260
Uncharacterized protein.
    
 0.861
17.m07173
Rab7.
    
 0.764
17.m10679
Rab1a.
    
 0.753
17.m07097
Rab1b.
    
 0.753
17.m07126
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.736
23.m06418
Rab2.
    
 0.729
BBOV_IV011660
Tyrosine phosphatase, putative.
    
 0.707
23.m06035
Ras-related protein Rab11A.
    
 0.692
BBOV_II005980
Rab11b protein, putative.
    
 0.692
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.