Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
16.m00954 | 17.m07486 | A7AXB5 | A7ANH3 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
16.m00954 | 17.m07661 | A7AXB5 | A7AP33 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.455 |
16.m00954 | 17.m07896 | A7AXB5 | A7APV6 | Uncharacterized protein. | MCM2/3/5 family protein; Belongs to the MCM family. | 0.998 |
16.m00954 | 18.m06427 | A7AXB5 | A7AU57 | Uncharacterized protein. | DNA replication licensing factor MCM4; Belongs to the MCM family. | 0.998 |
16.m00954 | 18.m06488 | A7AXB5 | A7AUC9 | Uncharacterized protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
16.m00954 | 21.m02879 | A7AXB5 | A7AVG1 | Uncharacterized protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.969 |
16.m00954 | 21.m02984 | A7AXB5 | A7AVX9 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
16.m00954 | 23.m06024 | A7AXB5 | A7AS39 | Uncharacterized protein. | DNA replication licensing factor MCM5, putative; Belongs to the MCM family. | 0.999 |
16.m00954 | 23.m06142 | A7AXB5 | A7AR97 | Uncharacterized protein. | Minichromosome maintenance protein 3, putative; Belongs to the MCM family. | 0.999 |
16.m00954 | MCM7 | A7AXB5 | A7ARB5 | Uncharacterized protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.999 |
17.m07486 | 16.m00954 | A7ANH3 | A7AXB5 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
17.m07486 | 17.m07896 | A7ANH3 | A7APV6 | Uncharacterized protein. | MCM2/3/5 family protein; Belongs to the MCM family. | 0.989 |
17.m07486 | 18.m06427 | A7ANH3 | A7AU57 | Uncharacterized protein. | DNA replication licensing factor MCM4; Belongs to the MCM family. | 0.986 |
17.m07486 | 18.m06488 | A7ANH3 | A7AUC9 | Uncharacterized protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
17.m07486 | 21.m02879 | A7ANH3 | A7AVG1 | Uncharacterized protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.961 |
17.m07486 | 21.m02984 | A7ANH3 | A7AVX9 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
17.m07486 | 23.m06024 | A7ANH3 | A7AS39 | Uncharacterized protein. | DNA replication licensing factor MCM5, putative; Belongs to the MCM family. | 0.963 |
17.m07486 | 23.m06142 | A7ANH3 | A7AR97 | Uncharacterized protein. | Minichromosome maintenance protein 3, putative; Belongs to the MCM family. | 0.986 |
17.m07486 | MCM7 | A7ANH3 | A7ARB5 | Uncharacterized protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.982 |
17.m07661 | 16.m00954 | A7AP33 | A7AXB5 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.455 |
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