STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
21.m02844Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (89 aa)    
Predicted Functional Partners:
17.m07530
Sm domain containing protein.
   
 0.999
23.m05936
Small nuclear ribonucleoprotein F, putative.
   
 0.999
23.m06378
U2 small nuclear ribonucleoprotein A', putative.
   
 0.999
23.m06216
WD domain, G-beta repeat containing protein.
   
 
 0.999
23.m06497
Processing splicing factor 8, putative.
   
 0.999
23.m06020
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.999
23.m06014
U5 snRNP-associated subunit, putaitve.
   
 0.999
18.m06196
Small nuclear ribonucleoprotein Sm D3.
   
 0.999
18.m06335
U5 small nuclear ribonuclear protein, putative.
   
 0.999
BBOV_II005790
U1 snRNP, putative.
   
 0.999
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.