STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
19.m02342Base excision DNA repair protein, HhH-GPD family domain containing protein. (205 aa)    
Predicted Functional Partners:
17.m07523
Apurinic endonuclease (APN1) family protein.
  
 
 0.883
17.m07553
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
  
 
 0.727
19.m02329
8-oxoguanine DNA glycosylase, putative.
   
 
 0.727
16.m00783
ImpB/MucB/SamB family protein.
  
 
 0.726
18.m06485
5'-3' exonuclease, N-terminal resolvase-like domain, putative.
  
  
 0.694
21.m02964
DNA ligase I; Belongs to the ATP-dependent DNA ligase family.
     
 0.686
23.m06017
Phosphoglycerate kinase.
     
 0.682
23.m06225
DNA mismatch repair protein, putative.
   
 
 0.676
18.m06322
XPG I-region family protein.
  
 
 0.669
17.m07901
3'-5' exonuclease domain containing protein.
     
 0.648
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.