STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBOV_V000110RpoC2-N-terminal. (355 aa)    
Predicted Functional Partners:
BBOV_V000120
RpoC1.
  
  
 0.955
19.m02023
DNA-directed RNA polymerase II, putative.
  
 0.924
18.m06094
DNA-directed RNA polymerase subunit I, putative.
  
 0.923
17.m07860
RNA polymerase Rpb5, N-terminal domain containing protein.
  
 0.914
BBOV_V000100
Uncharacterized protein.
     
  0.900
17.m07044
KOW motif family protein.
   
 0.895
17.m07366
Uncharacterized protein.
   
 0.892
17.m07387
RNA polymerases N / 8 kDa subunit family protein.
  
 0.885
18.m06627
DNA-directed RNA polymerase 2 subunit, putative; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.885
23.m06188
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.884
Your Current Organism:
Babesia bovis
NCBI taxonomy Id: 5865
Other names: B. bovis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.