STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0105370SNF2 domain-containing protein / helicase domain-containing protein, putative. (862 aa)    
Predicted Functional Partners:
BBBOND_0200270
Rad2 endonuclease, putative.
   
 0.999
BBBOND_0102750
DNA-directed RNA polymerase 2 subunit, putative.
    
 0.997
BBBOND_0202030
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.997
BBBOND_0205680
annotation not available
    
 0.993
BBBOND_0308100
RNA polymerase Rpb4 family protein, putative.
    
 0.989
BBBOND_0206320
DNA-directed RNA polymerase II, putative.
   
 0.987
BBBOND_0313690
RNA polymerase Rpb5, N-terminal domain containing protein, putative.
    
 0.982
BBBOND_0310950
Uncharacterized protein.
    
 0.981
BBBOND_0201270
DNA-directed RNA polymerase subunit I, putative.
   
 0.981
BBBOND_0209780
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.981
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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