STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0205460RNA recognition motif domain containing protein, putative. (272 aa)    
Predicted Functional Partners:
BBBOND_0402620
-mRNA 3'-end-processing protein RNA14.
   
 0.959
BBBOND_0405580
Cleavage and polyadenylation specifity factor, putative.
   
 0.957
BBBOND_0100060
CPSF_A domain-containing protein.
   
 0.955
BBBOND_0102410
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.955
BBBOND_0103350
WD domain, G-beta repeat containing protein, putative.
    
 0.955
BBBOND_0201780
Symplekin_C domain-containing protein.
   
 0.955
BBBOND_0308410
YT521-B-like family protein, putative.
   
 0.944
BBBOND_0300270
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.927
BBBOND_0110290
WD repeat domain containing protein, putative.
    
 0.920
BBBOND_0206590
RNA binding protein, putative.
  
 0.904
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.