STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0103240WD domain, G-beta repeat containing protein, putative. (443 aa)    
Predicted Functional Partners:
BBBOND_0303490
BOP1NT (NUC169) domain containing protein, putative.
   
 
 0.984
BBBOND_0106180
Uncharacterized protein.
   
 
 0.951
BBBOND_0309530
Brix domain containing protein, putative.
   
    0.949
BBBOND_0205610
Ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.937
BBBOND_0402220
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.929
BBBOND_0404610
DEAD/DEAH box helicase, putative.
   
 
 0.927
BBBOND_0209870
WD domain, G-beta repeat containing protein, putative.
   
 
 0.926
BBBOND_0203610
Bystin family protein, putative.
   
  
 0.925
BBBOND_0303880
WD domain, G-beta repeat containing protein, putative.
   
  
 0.923
BBBOND_0200840
Periodic tryptophan protein 2-like protein, putative.
   
  
 0.915
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.