STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0403490JmjC transcription factor, putative. (743 aa)    
Predicted Functional Partners:
BBBOND_0106060
ATP synthase F1 delta subunit, putative.
  
 0.992
BBBOND_0209450
ATP synthase F1 gamma subunit, putative.
  
 0.992
BBBOND_0310610
ATP synthase, Delta/Epsilon chain, beta-sandwich domain containing protein, putative.
  
 0.992
BBBOND_0303740
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.992
BBBOND_0400380
Uncharacterized protein.
    
 0.953
BBBOND_0201850
Histone H3; Belongs to the histone H3 family.
   
 0.933
BBBOND_0101030
Core histone H2A/H2B/H3/H4 family protein, putative.
   
 0.933
BBBOND_0201860
Histone H2A; Belongs to the histone H2A family.
    
 0.933
BBBOND_0207180
Histone H3; Belongs to the histone H3 family.
   
 0.933
BBBOND_0202650
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
  
 0.930
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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