STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0301480Protein phosphatase family protein, putative. (854 aa)    
Predicted Functional Partners:
BBBOND_0100140
Uncharacterized protein.
   
 0.958
BBBOND_0206320
DNA-directed RNA polymerase II, putative.
    
 0.938
BBBOND_0202030
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.901
BBBOND_0308100
RNA polymerase Rpb4 family protein, putative.
    
 0.880
BBBOND_0311050
Probable DNA-directed RNA polymerase.
   
 0.849
BBBOND_0209640
DNA-directed RNA polymerase II, putative.
    
 0.848
BBBOND_0209680
DNA-directed RNA polymerase II.
    
 0.848
BBBOND_0201270
DNA-directed RNA polymerase subunit I, putative.
   
 0.831
BBBOND_0207580
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.826
BBBOND_0103395
DUF1279 domain-containing protein.
    
 0.826
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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