STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0203570Peptide chain release factor 2, putative. (329 aa)    
Predicted Functional Partners:
BBBOND_0301360
40S ribosomal protein S5, putative.
   
 
 0.903
BBBOND_0400990
Ribosomal protein L27, putative.
  
 
 0.898
BBBOND_0304280
Ankyrin repeat family protein, putative.
   
 0.894
BBBOND_0308930
Ribosomal protein L20, putative; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.891
BBBOND_0107520
Ribosomal protein S16, putative.
  
 
 0.885
BBBOND_0311850
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.875
BBBOND_0203200
40S ribosomal subunit protein S14, putative; Belongs to the universal ribosomal protein uS11 family.
  
 
 0.873
BBBOND_0201880
Ribosomal protein L19-like protein, putative.
  
 
 0.866
BBBOND_0204860
Uncharacterized protein.
  
 
 0.851
BBBOND_0204850
Uncharacterized protein.
  
 
 0.851
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.