STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0309370RNA helicase. (839 aa)    
Predicted Functional Partners:
BBBOND_0303490
BOP1NT (NUC169) domain containing protein, putative.
   
 0.984
BBBOND_0312850
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.982
BBBOND_0312640
WD domain, G-beta repeat containing protein, putative.
   
 0.981
BBBOND_0100620
RNA recognition motif containing protein, putative.
   
 
 0.960
BBBOND_0301530
Ribosomal protein Se8, putative.
   
 
 0.955
BBBOND_0205560
rRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED,putative.
   
 0.954
BBBOND_0201460
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 0.944
BBBOND_0106180
Uncharacterized protein.
   
 
 0.943
BBBOND_0104170
Nucleolar protein-like protein with NOL1/NOP2/sun family putative RNA methylase domain; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.938
BBBOND_0203760
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.938
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.