STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0309870Cell differentiation family protein, putative. (325 aa)    
Predicted Functional Partners:
BBBOND_0205040
Endonuclease/exonuclease/phosphatase family protein, putative.
    
 0.999
BBBOND_0211040
CCR4-NOT TRANSCRIPTION COMPLEX RELATED domain containing protein,putative.
    
 0.999
BBBOND_0307300
CAF1 family ribonuclease containing protein, putative.
   
 0.999
BBBOND_0104620
DSHCT (NUC185) domain containing DEAD/DEAH box helicase family protein, putative.
   
 
 0.984
BBBOND_0100260
Glutamine cyclotransferase, putative.
    
 0.975
BBBOND_0104770
Uncharacterized protein.
    
 0.970
BBBOND_0111080
Transcriptional regulatory protein, putative.
    
 0.970
BBBOND_0309560
MJ0570-related uncharacterized domain containing protein, putative.
    
 
 0.822
BBBOND_0307570
Poly(A) RNA polymerase protein 2.
    
 
 0.808
BBBOND_0304720
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.753
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.