STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0311170Exosome complex component RRP40. (208 aa)    
Predicted Functional Partners:
BBBOND_0101420
Exosome complex exonuclease RRP4.
   
 0.999
BBBOND_0106200
Uncharacterized protein.
  
 0.999
BBBOND_0105860
Uncharacterized protein.
  
 0.999
BBBOND_0211650
Exosome component 10, putative.
   
 0.999
BBBOND_0210645
S1 motif domain-containing protein.
   
 0.999
BBBOND_0307120
RNase_PH domain-containing protein.
   
 0.999
BBBOND_0403970
3' exoribonuclease family, domain 1 containing protein, putative.
   
 0.999
BBBOND_0104620
DSHCT (NUC185) domain containing DEAD/DEAH box helicase family protein, putative.
   
 0.998
BBBOND_0307050
Elongation factor Tu GTP binding domain containing protein, putative.
    
 0.994
BBBOND_0202240
Helicase with zinc finger motif protein, putative.
   
 0.966
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.