STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0311620DNA-binding protein. (113 aa)    
Predicted Functional Partners:
BBBOND_0211640
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.835
BBBOND_0302500
40S ribosomal protein S19, putative.
  
    0.829
BBBOND_0204940
40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS17 family.
   
    0.822
BBBOND_0301360
40S ribosomal protein S5, putative.
   
    0.819
BBBOND_0307510
Ribosomal protein L7Ae containing protein, putative.
   
    0.812
BBBOND_0404560
40S ribosomal protein S28, putative.
  
    0.803
BBBOND_0105470
Ribosomal protein L35, putative.
   
    0.801
BBBOND_0201520
40S ribosomal protein S3 protein, putative.
   
  
 0.801
BBBOND_0110635
EF1_GNE domain-containing protein.
   
    0.799
BBBOND_0311850
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  
 0.797
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.