STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0301890Rhomboid family protein, putative. (477 aa)    
Predicted Functional Partners:
BBBOND_0208010
Rhomboid domain-containing protein.
      
 0.619
BBBOND_0402330
Prohibitin.
   
 0.592
BBBOND_0211470
Prohibitin.
   
 0.556
BBBOND_0207590
Stomatin-like protein, putative.
   
 0.556
BBBOND_0201070
Mov34/MPN/PAD-1 family protein, putative; Belongs to the eIF-3 subunit F family.
  
  
 0.435
BBBOND_0208870
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
   
 
 0.434
BBBOND_0110270
Cell division protein metalloprotease FtsH, putative; Belongs to the AAA ATPase family.
   
 
 0.434
BBBOND_0200660
ATP-dependent metalloprotease FtsH family protein, putative; Belongs to the AAA ATPase family.
   
 
 0.434
BBBOND_0309360
ATP-dependent metalloprotease FtsH family protein, putative.
   
 
 0.434
BBBOND_0313570
ATPase_AAA_core domain-containing protein.
   
 
 0.434
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.