STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0304240tRNA (Guanine-N1)-methyltransferase family protein, putative. (203 aa)    
Predicted Functional Partners:
BBBOND_0110500
tRNA pseudouridine synthase, putative.
   
 
 0.628
BBBOND_0309000
tRNA pseudouridine synthase.
   
 
 0.610
BBBOND_0105040
tRNA (adenine(58)-N(1))-methyltransferase.
   
 
 0.574
BBBOND_0107359
Uncharacterized protein.
   
  
 0.574
BBBOND_0210470
RNA methylase, putative.
   
 
 0.570
BBBOND_0312850
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
  
 0.549
BBBOND_0302560
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.545
BBBOND_0100620
RNA recognition motif containing protein, putative.
   
   0.525
BBBOND_0402680
SpoU_methylase domain-containing protein.
   
 
 0.513
BBBOND_0104550
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.500
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.