STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBBOND_0306340Rab1a, putative. (227 aa)    
Predicted Functional Partners:
BBBOND_0210910
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.954
BBBOND_0108290
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.953
BBBOND_0307470
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.953
BBBOND_0302510
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.952
BBBOND_0307630
TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B, putative.
   
 0.952
BBBOND_0105830
Uncharacterized protein.
    
 0.950
BBBOND_0307580
Sedlin, N-terminal conserved region family protein, putative.
    
 0.948
BBBOND_0307780
SYNTAXIN, putative.
    
 0.870
BBBOND_0306280
VACUOLAR PROTEIN SORTING (VPS33), putative; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.869
BBBOND_0205010
Vesicle transport protein, putative; Belongs to the synaptobrevin family.
   
 0.863
Your Current Organism:
Babesia bigemina
NCBI taxonomy Id: 5866
Other names: B. bigemina
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.