STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005000003annotation not available (57 aa)    
Predicted Functional Partners:
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.745
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.736
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.673
ENSMMDP00005029951
annotation not available
   
 0.673
LOC115369081
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.654
ENSMMDP00005055100
Heterogeneous nuclear ribonucleoprotein K.
   
 0.654
polr2l
RNA polymerase II subunit L.
   
  0.648
polr2k
RNA polymerase II subunit K.
   
  0.635
polr2i
RNA polymerase II subunit I.
    
  0.632
polr2d
RNA polymerase II subunit D.
    
  0.632
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.