STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfdn5Prefoldin subunit 5. (159 aa)    
Predicted Functional Partners:
vbp1
VHL binding protein 1.
   
 0.999
ENSMMDP00005010080
Prefoldin subunit 4.
  
 0.999
pfdn2
Prefoldin subunit 2.
   
 0.999
pfdn1
Prefoldin subunit 1.
   
 0.999
pfdn6
Prefoldin subunit 6.
   
 0.999
cct4
Chaperonin containing TCP1 subunit 4.
   
 0.974
cct7
Chaperonin containing TCP1 subunit 7.
   
 0.952
tcp1
T-complex 1.
   
 0.947
cct3
Chaperonin containing TCP1 subunit 3.
   
 0.946
pdrg1
P53 and DNA damage regulated 1.
     
 0.945
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.