STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005000489annotation not available (1580 aa)    
Predicted Functional Partners:
ENSMMDP00005033717
Apoptotic peptidase activating factor 1.
   
 0.774
pold2
DNA polymerase delta 2, accessory subunit.
    
 0.752
ENSMMDP00005050350
annotation not available
    
 0.732
ENSMMDP00005022390
Polymerase (DNA directed), delta 1, catalytic subunit.
   
 0.703
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.660
ddx20
DEAD-box helicase 20.
   
 0.657
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.626
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.620
ENSMMDP00005005588
Rho guanine nucleotide exchange factor (GEF) 3, like.
    
 0.617
ENSMMDP00005020959
Rho guanine nucleotide exchange factor (GEF) 3.
    
 0.617
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.