STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpn3GPN-loop GTPase 3. (281 aa)    
Predicted Functional Partners:
gpn1
GPN-loop GTPase 1.
   
 
0.966
polr2c
RNA polymerase II subunit C.
   
 
 0.933
rpap2
RNA polymerase II associated protein 2.
    
 
 0.932
polr1c
RNA polymerase I and III subunit C.
   
 
 0.881
polr2b
RNA polymerase II subunit B.
   
 
 0.872
polr3b
RNA polymerase III subunit B.
   
 
 0.870
polr3d
RNA polymerase III subunit D.
    
 
 0.865
polr2f
RNA polymerase II subunit F.
   
 
 0.857
polr2l
RNA polymerase II subunit L.
    
 
 0.854
polr2d
RNA polymerase II subunit D.
    
 
 0.849
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.