STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115367784GA-binding protein subunit beta-2-like. (415 aa)    
Predicted Functional Partners:
gabpa
GA binding protein transcription factor subunit alpha.
    
 0.973
ENSMMDP00005024705
Caspase 2, apoptosis-related cysteine peptidase.
    
  0.761
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.733
tpd52l2
TPD52 like 2.
    
  0.658
ENSMMDP00005021115
Tumor protein p73.
    
  0.653
ENSMMDP00005043618
Tumor protein p63.
    
  0.653
LOC115377335
Cathepsin B-like.
   
   0.639
ctsb
Cathepsin B.
   
   0.639
mars1
methionyl-tRNA synthetase 1.
   
 0.634
ift81
Intraflagellar transport 81.
    
 0.629
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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