STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nipsnap2Nipsnap homolog 2. (297 aa)    
Predicted Functional Partners:
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.784
ENSMMDP00005007389
Small integral membrane protein 12.
   
  
 0.772
utp15
UTP15 small subunit processome component.
   
    0.747
wdr6
WD repeat domain 6.
   
    0.744
nop56
NOP56 ribonucleoprotein.
   
    0.724
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
  0.685
rab40c
RAB40C, member RAS oncogene family.
   
 
  0.643
ENSMMDP00005016147
RAB40c, member RAS oncogene family.
   
 
  0.643
ENSMMDP00005038156
RAB40B, member RAS oncogene family.
   
 
  0.643
dbt
Dihydrolipoamide branched chain transacylase E2.
   
 
  0.625
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.