STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005002660annotation not available (862 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.998
rplp0
Ribosomal protein lateral stalk subunit P0.
  
 0.991
rpl4
Ribosomal protein L4.
  
 0.990
ENSMMDP00005031213
Ribosomal protein S2.
  
 0.990
rps3
Ribosomal protein S3.
  
 0.989
rpl8
Ribosomal protein L8.
  
 0.989
ENSMMDP00005007944
Ribosomal protein L11.
  
 0.988
rps6
Ribosomal protein S6.
   
 0.987
rps18
Ribosomal protein S18.
  
 0.987
rpl35
Ribosomal protein L35.
  
 0.987
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.