STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr55WD repeat domain 55. (423 aa)    
Predicted Functional Partners:
wdr12
WD repeat domain 12.
  
 
 0.938
ENSMMDP00005018796
annotation not available
 
      0.896
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.816
ttc27
Tetratricopeptide repeat domain 27.
   
    0.799
wdr18
WD repeat domain 18.
   
 
 0.775
wdr74
WD repeat domain 74.
   
    0.773
trmt6
tRNA methyltransferase 6.
   
    0.767
ENSMMDP00005042062
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
   
  0.728
ENSMMDP00005028603
Pescadillo.
   
   0.724
ENSMMDP00005007367
FtsJ RNA 2'-O-methyltransferase 3.
   
   0.695
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.