STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tapt1Transmembrane anterior posterior transformation 1. (572 aa)    
Predicted Functional Partners:
ENSMMDP00005033191
SUN domain containing ossification factor.
    
   0.762
cstf1
Cleavage stimulation factor subunit 1.
 
      0.660
LOC115370323
Zinc finger FYVE domain-containing protein 1-like.
   
    0.529
ZFYVE1
Zinc finger FYVE domain-containing protein 1-like.
   
    0.529
ENSMMDP00005027155
Zinc finger, FYVE domain containing 1.
   
    0.529
ENSMMDP00005013893
annotation not available
   
 
  0.521
tra2b
Transformer 2 beta homolog.
   
 
  0.521
tra2a
Transformer 2 alpha homolog.
   
 
  0.521
ENSMMDP00005037961
annotation not available
      
 0.452
spp2
Secreted phosphoprotein 2.
   
  
 0.421
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.