STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsf2bpHeat shock transcription factor 2 binding protein. (345 aa)    
Predicted Functional Partners:
ENSMMDP00005016864
BRCA2 DNA repair associated.
    
 
 0.927
palb2
Partner and localizer of BRCA2.
    
 
 0.568
ENSMMDP00005050252
SWIM-type zinc finger 7 associated protein 1.
      
 0.568
rpa3
Replication protein A3.
      
 0.551
tmem183a
Transmembrane protein 183A.
      
 0.544
haus8
HAUS augmin like complex subunit 8.
      
 0.537
ENSMMDP00005031145
Spermatogenesis associated 22.
      
 0.537
CLSPN
Claspin.
      
 0.537
LOC115362930
Synaptonemal complex central element protein 2-like.
      
 0.534
lrrc42
Leucine rich repeat containing 42.
      
 0.481
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.