STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etf1Eukaryotic translation termination factor 1. (443 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.997
ENSMMDP00005004335
annotation not available
   
 
 0.991
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.991
LOC115364337
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 0.988
LOC115378115
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like.
   
 0.988
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 
 0.976
ENSMMDP00005031213
Ribosomal protein S2.
   
 0.951
rpl8
Ribosomal protein L8.
  
 0.950
rps3
Ribosomal protein S3.
   
 0.948
RPS20
Ribosomal protein S20.
  
 0.947
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.