STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn7UBX domain protein 7. (526 aa)    
Predicted Functional Partners:
ubxn1
UBX domain protein 1.
   
 0.999
LOC115360079
Transitional endoplasmic reticulum ATPase-like.
   
 0.999
SPATA5
Spermatogenesis associated 5.
   
 0.999
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.999
vcp
Valosin containing protein.
   
 0.999
spata5l1
Spermatogenesis associated 5 like 1.
   
 0.999
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 0.999
psmb2
Proteasome 20S subunit beta 2.
    
  0.999
faap100
FA core complex associated protein 100.
    
 0.999
cul2
Cullin 2.
    
 0.999
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.