STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115368860poly(ADP-ribose) glycohydrolase-like. (594 aa)    
Predicted Functional Partners:
parp1
poly(ADP-ribose) polymerase 1.
    
 0.890
parp2
poly(ADP-ribose) polymerase 2.
    
 0.882
parp3
poly(ADP-ribose) polymerase family member 3.
    
 0.867
ENSMMDP00005008871
Von Willebrand factor A domain containing 5B2.
    
 0.818
parp4
poly(ADP-ribose) polymerase family member 4.
    
 0.818
pcna
Proliferating cell nuclear antigen.
    
   0.747
ENSMMDP00005037724
Zgc:110269.
     
 0.585
fen1
Flap structure-specific endonuclease 1.
     
 0.585
polb
DNA polymerase beta.
     
 0.550
ENSMMDP00005052627
APEX nuclease (multifunctional DNA repair enzyme) 1.
     
 0.511
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.