STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005005859annotation not available (334 aa)    
Predicted Functional Partners:
LOC115374146
Uncharacterized LOC115374146.
    
  0.749
ENSMMDP00005055325
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.605
wdr18
WD repeat domain 18.
   
 0.576
ENSMMDP00005004297
Tenascin N.
   
 0.568
tex10
Testis expressed 10.
    
 0.563
ENSMMDP00005042126
annotation not available
    
  0.557
ENSMMDP00005028603
Pescadillo.
   
 0.555
ENSMMDP00005006280
annotation not available
   
  0.532
LOC115373424
H-2 class II histocompatibility antigen, A-U alpha chain-like.
   
  0.532
rpl30
Ribosomal protein L30.
    
  0.511
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.