STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005005862Nucleoporin 35. (263 aa)    
Predicted Functional Partners:
ENSMMDP00005019902
Nucleoporin 93.
   
 0.998
ENSMMDP00005025491
Nucleoporin 155.
   
 0.998
nup205
Nucleoporin 205.
   
 0.997
NUP54
Nucleoporin 54.
   
 0.995
nup85
Nucleoporin 85.
   
 0.995
nup98
Nucleoporin 98.
   
 0.995
nup43
Nucleoporin 43.
   
 0.995
nup58
Nucleoporin 58.
    
 0.990
nup62
Nucleoporin 62.
    
 0.990
ndc1
NDC1 transmembrane nucleoporin.
    
 0.988
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.