STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlnrd1Talin rod domain containing 1. (354 aa)    
Predicted Functional Partners:
ENSMMDP00005015441
Vinculin a.
   
 0.937
ENSMMDP00005037487
Vinculin b.
   
 0.937
ENSMMDP00005025647
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
    
 0.887
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
    
 0.887
ENSMMDP00005035938
Integrin, beta 4.
   
 0.884
ENSMMDP00005022443
Integrin, beta 8.
   
 0.883
ENSMMDP00005018896
Integrin, beta 6.
   
 0.882
ENSMMDP00005001737
Catenin (cadherin-associated protein), alpha 2.
   
 0.842
ENSMMDP00005001883
annotation not available
   
 0.842
ctnna1
Catenin alpha 1.
   
 0.842
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.