STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005007202annotation not available (238 aa)    
Predicted Functional Partners:
stx8
Syntaxin 8.
    
 0.922
vamp4
Vesicle associated membrane protein 4.
   
 0.916
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.911
ENSMMDP00005007593
annotation not available
   
 0.891
LOC115377863
Vesicle-fusing ATPase-like.
   
 0.891
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.886
stx16
Syntaxin 16.
    
 0.884
ENSMMDP00005017423
NBAS subunit of NRZ tethering complex.
    
 0.873
tsnare1
t-SNARE domain containing 1.
    
 0.871
stx17
Syntaxin 17.
    
 0.869
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.