STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005007287LHFPL tetraspan subfamily member 4a. (321 aa)    
Predicted Functional Partners:
ENSMMDP00005035518
Protocadherin-related 15a.
   
 0.708
ENSMMDP00005037512
annotation not available
   
 0.708
ENSMMDP00005052772
annotation not available
   
 0.708
ENSMMDP00005041033
Transmembrane inner ear.
     
 0.597
ENSMMDP00005016237
Cadherin-related 23.
   
 0.537
LOC115375433
Cadherin-7-like.
   
 0.499
CDH7
Cadherin 7.
   
 0.499
ENSMMDP00005048469
Cadherin 11, type 2, OB-cadherin (osteoblast).
   
 0.499
CDH8
Cadherin-8-like.
   
 0.499
ENSMMDP00005017326
annotation not available
   
 0.492
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.