STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsg101Tumor susceptibility 101. (390 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.994
vps37b
VPS37B subunit of ESCRT-I.
    
 0.992
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.991
mvb12a
Multivesicular body subunit 12A.
    
 0.990
vps37a
VPS37A subunit of ESCRT-I.
   
 0.986
vps36
Vacuolar protein sorting 36 homolog.
    
 0.971
LOC115358750
Vacuolar protein sorting-associated protein 37C-like.
    
 0.971
ENSMMDP00005007723
Multivesicular body subunit 12Bb.
    
 0.970
mvb12b
Multivesicular body subunit 12B.
    
 0.970
rps27a
Ribosomal protein S27a.
    
 0.968
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.