STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005007790annotation not available (271 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
   0.826
ENSMMDP00005036755
annotation not available
   
   0.662
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.662
mrpl22
Mitochondrial ribosomal protein L22.
   
 
 0.661
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.660
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.659
LOC115360965
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.653
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.652
LOC115367690
39S ribosomal protein L3, mitochondrial-like.
   
 
 0.649
mrps6
Mitochondrial ribosomal protein S6.
   
   0.645
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.