STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR1WD repeat domain 1. (621 aa)    
Predicted Functional Partners:
capzb
Capping actin protein of muscle Z-line subunit beta.
   
 
 0.951
LOC115374097
Actin-related protein 3-like.
   
 0.869
ENSMMDP00005010913
Actin related protein 3B.
   
 0.869
actr3
Actin related protein 3.
   
 0.869
LOC115366791
Actin, cytoplasmic 1-like.
   
 0.848
LOC115364875
Actin, cytoplasmic 1-like.
   
 0.848
actb
Actin beta.
   
 0.848
acta2
Actin alpha 2, smooth muscle.
   
 0.848
LOC115360238
Actin, alpha cardiac muscle 1-like.
   
 0.848
ACTC1-3
Actin, alpha cardiac muscle 1-like.
   
 0.848
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.