STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF7DDB1- and CUL4-associated factor 7. (342 aa)    
Predicted Functional Partners:
ENSMMDP00005050064
Damage-specific DNA binding protein 1.
    
 0.946
ercc8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
     
 0.909
dtl
Denticleless E3 ubiquitin protein ligase homolog.
     
 0.892
ambra1
Autophagy and beclin 1 regulator 1.
    
  0.878
dcaf11
DDB1 and CUL4 associated factor 11.
    
 0.876
dcaf10
DDB1 and CUL4 associated factor 10.
     
 0.858
fbxw5
F-box and WD repeat domain containing 5.
     
 0.855
rbx1
Ring-box 1.
     
 0.849
LOC115370548
Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like.
   
 
 0.848
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
   
 
 0.848
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.