STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxcr5C-X-C motif chemokine receptor 5. (371 aa)    
Predicted Functional Partners:
LOC115372323
Stromal cell-derived factor 1-like.
    
 0.941
ENSMMDP00005027882
annotation not available
    
 0.925
ENSMMDP00005027885
annotation not available
    
 0.925
cxcl14
C-X-C motif chemokine ligand 14.
     
 0.902
LOC115376778
C-C motif chemokine 3-like.
    
 0.901
LOC115356338
C-C motif chemokine 4-like.
    
 0.882
ENSMMDP00005032774
Chemokine (C-C motif) ligand 25a.
    
 0.881
ENSMMDP00005029221
G protein-coupled receptor kinase 7b.
    
  0.871
LOC115374743
Rhodopsin kinase 1-like.
    
  0.871
ccl17
C-C motif chemokine ligand 17.
    
 0.860
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.