STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pirPirin. (298 aa)    
Predicted Functional Partners:
ENSMMDP00005051174
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
    
 0.885
ENSMMDP00005044596
Platelet derived growth factor c.
     
 0.876
ENSMMDP00005004076
Si:ch211-167j9.5.
    
  0.867
ENSMMDP00005000743
Vascular endothelial growth factor c.
 
   
 0.866
ENSMMDP00005046275
Platelet derived growth factor d.
     
 0.861
ENSMMDP00005034339
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.860
ENSMMDP00005007907
Macrophage stimulating 1 receptor a.
    
 0.854
ENSMMDP00005016241
MET proto-oncogene, receptor tyrosine kinase.
    
 0.854
ENSMMDP00005017904
Macrophage stimulating 1 receptor b.
    
 0.854
ENSMMDP00005015940
Placental growth factor b.
     
 0.847
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.