STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115361558Transmembrane emp24 domain-containing protein 4-like. (220 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
0.995
tmed2
Transmembrane p24 trafficking protein 2.
   
0.989
LOC115375903
TIR domain-containing adapter molecule 1-like.
   
 0.930
LOC115365734
Transmembrane emp24 domain-containing protein 7-like.
   
0.930
LOC115364885
Surfeit locus protein 4-like.
   
 0.851
surf4
Surfeit 4.
   
 0.851
LOC115357545
Vesicle-trafficking protein SEC22b-B.
   
 0.777
LOC115375792
Vesicle-trafficking protein SEC22b-B-like.
   
 0.777
copb1
Coatomer protein complex subunit beta 1.
   
 0.774
sec22c
SEC22 homolog C, vesicle trafficking protein.
   
 0.761
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.