STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddb2Damage specific DNA binding protein 2. (498 aa)    
Predicted Functional Partners:
ENSMMDP00005050064
Damage-specific DNA binding protein 1.
    
 0.999
rbx1
Ring-box 1.
    
 0.994
ENSMMDP00005030063
Cullin 4A.
    
 0.985
cul4b
Cullin 4B.
    
 0.985
dtl
Denticleless E3 ubiquitin protein ligase homolog.
   
 0.966
cop1
COP1 E3 ubiquitin ligase.
    
 0.962
dcaf4
DDB1 and CUL4 associated factor 4.
     
 0.962
dcaf5
DDB1 and CUL4 associated factor 5.
     
 0.962
ercc8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.961
cops5
COP9 signalosome subunit 5.
    
 0.957
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.