STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uevldUEV and lactate/malate dehyrogenase domains. (470 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.995
mvb12a
Multivesicular body subunit 12A.
    
 0.986
vps36
Vacuolar protein sorting 36 homolog.
    
 0.984
ENSMMDP00005007723
Multivesicular body subunit 12Bb.
    
 0.982
mvb12b
Multivesicular body subunit 12B.
    
 0.982
vps37a
VPS37A subunit of ESCRT-I.
    
 0.980
ENSMMDP00005021047
Si:ch211-284f22.3.
    
 0.980
vps37b
VPS37B subunit of ESCRT-I.
    
 0.980
LOC115358750
Vacuolar protein sorting-associated protein 37C-like.
    
 0.980
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.979
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.