STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115366368Caltractin-like. (174 aa)    
Predicted Functional Partners:
xpc
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.985
ENSMMDP00005011945
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.981
ENSMMDP00005041523
PCI domain containing 2.
    
 0.976
mcm3ap
Minichromosome maintenance complex component 3 associated protein.
    
 0.973
ENSMMDP00005003704
Nucleoporin 153.
    
 0.949
LOC115367404
Transcription and mRNA export factor ENY2-2-like.
   
 0.942
eny2
ENY2 transcription and export complex 2 subunit.
   
 0.942
ENSMMDP00005010791
SFI1 centrin binding protein.
    
 
 0.908
sac3d1
SAC3 domain containing 1.
    
 0.905
ENSMMDP00005018516
annotation not available
  
0.898
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.