STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005009242Fibrosin. (1248 aa)    
Predicted Functional Partners:
ENSMMDP00005054817
Polycomb group ring finger 5a.
    
 0.937
ENSMMDP00005011859
Checkpoint kinase 2.
   
 0.926
ENSMMDP00005023989
Checkpoint kinase 1.
   
 0.919
PCGF3
Polycomb group ring finger 3.
    
 0.844
PLK1
Polo like kinase 1.
   
 0.775
plk3
Polo like kinase 3.
   
 0.775
plk2
Polo like kinase 2.
   
 0.775
plk4
Polo like kinase 4.
   
 0.775
ccne1
Cyclin E1.
   
 0.769
CCNE2
G1/S-specific cyclin-E2-like.
   
 0.769
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.