STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005009462annotation not available (95 aa)    
Predicted Functional Partners:
ENSMMDP00005033508
annotation not available
    
  0.872
LOC115374146
Uncharacterized LOC115374146.
    
  0.681
ENSMMDP00005033512
annotation not available
    
  0.601
bard1
BRCA1 associated RING domain 1.
    
  0.601
ENSMMDP00005025824
annotation not available
    
 0.568
YTHDC2
YTH domain containing 2.
    
  0.562
znrd1
Zinc ribbon domain containing 1.
    
 0.538
ENSMMDP00005044278
annotation not available
    
  0.531
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.530
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.529
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.