STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMDP00005010231Mitochondrial ribosomal protein L28. (252 aa)    
Predicted Functional Partners:
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.972
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.967
mrps18a
Mitochondrial ribosomal protein S18A.
   
   0.965
mrps26
Mitochondrial ribosomal protein S26.
   
 
 0.960
gadd45gip1
GADD45G interacting protein 1.
   
   0.958
mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.955
mrpl41
Mitochondrial ribosomal protein L41.
   
   0.955
LOC115367690
39S ribosomal protein L3, mitochondrial-like.
   
 
 0.951
mrpl47
Mitochondrial ribosomal protein L47.
    
 
 0.951
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.950
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.