STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115363235Histone H2A-like. (128 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.993
ENSMMDP00005015375
Lysine (K)-specific demethylase 6B, a.
    
 0.798
ENSMMDP00005048842
Lysine (K)-specific demethylase 6A, like.
    
 0.798
ENSMMDP00005054809
Lysine (K)-specific demethylase 6B, b.
    
 0.798
ENSMMDP00005055738
Lysine (K)-specific demethylase 6A.
    
 0.798
rps27a
Ribosomal protein S27a.
   
  0.734
LOC115365807
Histone H2A.V.
  
0.729
H2AZ1
Histone H2A.Z.
  
0.729
ssrp1
Structure specific recognition protein 1.
    
 0.728
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.724
Your Current Organism:
Myripristis murdjan
NCBI taxonomy Id: 586833
Other names: M. murdjan, Ostichthys murdjan, Perca murdjan, Sciaena murdjan, pinecone soldierfish
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